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Strain CFBP 5520

Agrobacterium rhizogenes
Type strain   

(Riker et al. 1930) Conn 1942 (Approved Lists 1980) emend. Sawada et al. 1993

Other collection accession numbers : ICMP 5794, ATCC 11325, NCPPB 2991, LMG 150, CCUG 12534C, DSM 30148, IFO 13257, IMET 11180

Isolated by Riker A.J.

Isolated from Malus X domestica Borkh ()

Strain transmitted to the collection in 2001 by ICMP

Remarks : souche type de Rhizobium rhizogenes (Riker et al. 1930) Young et al. 2001, comb. nov., emend.

Publications :
Biotechnol Educ, 2, 115, 1991
Syst Appl Microbiol, 12, 119, 1999
The Genus Bacillus, Int.J.Syst.Bacteriol., 1994, 1973
Aoyama S, Studies on the thiamin decomposing bacterium I Bacteriological researches of a new thiamin decomposing bacillus, Bacillus aneurinolyticus Kimura et Aoyama Acta Sch Med Univ Kyoto, 30, 127-132, 1952
Approved Lists of Bacterial Names, Int J Syst Bacteriol, 30, 225-420, 1980
Biotechnol, Educ, 2, 115-121, 1991
Notification that new names and new combinations have appeared in volume 51, part 1, of the IJSEM, Int J Syst Evol Microbiol, 51, 269, 2001 Mar [PMID: 11321070]
VITEK 2 BCL ID Card.bioMerieux, VITEK 2, VITEK 2
AOYAMA S, Studies on the thiamin-decomposing bacterium. I. Bacteriological researches of a new thiamin decomposing bacillus Bacillus aneurinolyticus Kimura et Aoyama, Acta Sch Med Univ Kioto, 30, 127-132, 1952 [PMID: 13040074]
de Oliveira VM, Coutinho HL, Sobral BW, Guimaraes CT, van Elsas JD, Manfio GP, Discrimination of Rhizobium tropici and R. leguminosarum strains by PCR-specific amplification of 16S-23S rDNA spacer region fragments and denaturing gradient gel electrophoresis (DGGE), Lett Appl Microbiol, 28, 137-141, 1999 Feb [PMID: 10063643]
Eardly BD, Nour SM, van Berkum P, Selander RK, Rhizobial 16S rRNA and dnaK genes: mosaicism and the uncertain phylogenetic placement of Rhizobium galegae, Appl Environ Microbiol, 71, 1328-1335, 2005 Mar [PMID: 15746335]
Gaunt MW, Turner SL, Rigottier-Gois L, Lloyd-Macgilp SA, Young JP, Phylogenies of atpD and recA support the small subunit rRNA-based classification of rhizobia, Int J Syst Evol Microbiol, 51, 2037-2048, 2001 Nov [PMID: 11760945]
Kwon SW, Park JY, Kim JS, Kang JW, Cho YH, Lim CK, Parker MA, Lee GB, Phylogenetic analysis of the genera Bradyrhizobium, Mesorhizobium, Rhizobium and Sinorhizobium on the basis of 16S rRNA gene and internally transcribed spacer region sequences, Int J Syst Evol Microbiol, 55, 263-270, 2005 Jan [PMID: 15653885]
Martens M, Dawyndt P, Coopman R, Gillis M, De Vos P, Willems A, Advantages of multilocus sequence analysis for taxonomic studies: a case study using 10 housekeeping genes in the genus Ensifer (including former Sinorhizobium), Int J Syst Evol Microbiol, 58, 200-214, 2008
Martens M, Delaere M, Coopman R, De Vos P, Gillis M, Willems A, Multilocus sequence analysis of Ensifer and related taxa, Int J Syst Evol Microbiol, 57, 489-503, 2007 Mar [PMID: 17329774]
Pulawska J, Maes M, Willems A, Sobiczewski P, Phylogenetic analysis of 23S rRNA gene sequences of. Agrobacterium, Rhizobium and Sinorhizobium strains, Syst Appl Microbiol, 23, 238-244, 2000 Jun [PMID: 10930076]
Riker AJ, et al, Studies on infectious hairy-root of nursery apple trees, J Agric Res, 41, 507-540, 1930
Sawada H, Ieki H, Oyaizu H, Matsumoto S, Proposal for rejection of Agrobacterium tumefaciens and revised descriptions for the genus Agrobacterium and for Agrobacterium radiobacter and Agrobacterium rhizogenes, Int J Syst Bacteriol, 43, 694-702, 1993 Oct [PMID: 8240952]
Sawada H, Kuykendall LD, Young JM, Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts, J Gen Appl Microbiol, 49, 155-179, 2003 Jun [PMID: 12949698]
Shida, O, Takagi, H, Kadowaki, K, Yano, H, Abe, M, Udaka, S, Komagata, K, Bacillus aneurinolyticus sp. nov., nom. rev, Int J Syst Bacteriol, 44, 143-150, 1994
Takagi H, Shida O, Kadowaki K, Komagata K, Udaka S, Characterization of Bacillus brevis with descriptions of Bacillus migulanus sp. nov., Bacillus choshinensis sp. nov., Bacillus parabrevis sp. nov., and Bacillus galactophilus sp. nov, Int J Syst Bacteriol, 43, 221-231, 1993 Apr [PMID: 8494737]
The genus Bacillus, Agriculture Handbook 427, Washington,, DC, "ARS/USDA; 1973."
van Berkum P, Terefework Z, Paulin L, Suomalainen S, Lindstrom K, Eardly BD, Discordant phylogenies within the rrn loci of Rhizobia, J Bacteriol, 185, 2988-2998, 2003 May [PMID: 12730157]
Velazquez E, Peix A, Zurdo-Pineiro JL, Palomo JL, Mateos PF, Rivas R, Munoz-Adelantado E, Toro N, Garcia-Benavides P, Martinez-Molina E, The coexistence of symbiosis and pathogenicity-determining genes in Rhizobium rhizogenes strains enables them to induce nodules and tumors or hairy roots in plants, Mol Plant Microbe Interact, 18, 1325-1332, 2005 Dec [PMID: 16478052]
Yanagi M, Yamasato K, Phylogenetic analysis of the family Rhizobiaceae and related bacteria by sequencing of 16S rRNA gene using PCR and DNA sequencer, FEMS Microbiol Lett, 107, 115-120, 1993 Feb 15 [PMID: 7682191]
Yokota, A, Sakane, T, Taxonomic signigicance of fatty acid compositions in whole cells and lipopolysaccharides in Rhizobiaceae, IFO Res Commun, 15, 57-75, 1991
Young JM, Kuykendall LD, Martinez-Romero E, Kerr A, Sawada H, A revision of Rhizobium Frank 1889, with an emended description of the genus, and the inclusion of all species of Agrobacterium Conn 1942 and Allorhizobium undicola de Lajudie et al. 1998 as new combinations: Rhizobium radiobacter, R. rhizogenes, R. rubi, R. undicola and R. vitis, Int J Syst Evol Microbiol, 51, 89-103, 2001 Jan [PMID: 11211278] .

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